As I stirred the vibrant orange mixture, a magical aroma filled my kitchen, instantly transporting me to a cozy, autumn-filled day. This Cheesy Pumpkin Pasta Bake with Mushroom and Spinach is my go-to dish when the crisp air beckons a hearty meal. It’s a delightful vegetarian recipe that marries creamy pumpkin tomato sauce with earthy mushrooms and tender spinach, all topped off with a buttery walnut-sage crunch. Not only is it packed with fall flavors, but it also sneaks a host of nutritious veggies into the mix—a true comfort food for everyone at the table, including the meat lovers among us. With quick prep and an irresistible taste, your weeknight dinners just got an upgrade! Are you ready to fill your home with warmth and deliciousness?

Why is this Pumpkin Pasta Bake Unique?
Creamy Comfort: The luscious pumpkin tomato sauce envelops each pasta piece, providing a velvety texture that makes every bite feel indulgent yet wholesome.
Nutty Crunch: Topped with a golden walnut-sage mixture, this dish offers a satisfying crunch that contrasts beautifully with the creamy filling beneath.
Seasonal Flavors: With the warm notes of sage, nutmeg, and pumpkin, this recipe perfectly captures the essence of fall, making it an ideal choice for chilly evenings.
Hearty Veggie Boost: Packed with nutrient-rich spinach and mushrooms, it’s a vegetarian dream that even hearty appetites will love! Pair it with a fresh green salad or alongside a serving of Brown Butter Pumpkin for an even more robust meal.
Quick and Easy: This bake can be prepped in under an hour, allowing you to bring delicious, homemade comfort food to your table without the fuss.
Eye-catching Presentation: The vibrant orange hue not only delights the palate but also makes for an impressive dish that’s perfect for sharing at gatherings.
Pumpkin Pasta Bake Ingredients
• Create a cozy meal with these key ingredients for your Pasta Bake with Pumpkin Tomato Sauce.
For the Pasta Base
- Dry Pasta – 1 lb. of tubular pasta (mezzi rigatoni, shells, or ziti) sets the perfect foundation for this creamy dish.
For the Walnut-Sage Topping
- Butter – 2 Tbsp. ensures flavorful richness while creating a luscious topping.
- Walnuts – ½ cup, finely chopped provides a delightful crunch; feel free to substitute with pecans for a twist.
- Fresh Sage – 2 Tbsp., finely chopped contributes a fragrant herbaceous note; you can opt for dried sage but use less.
For the Saucy Filling
- Olive Oil – 2 Tbsp. is essential for sautéing your veggies while adding healthy fats.
- Cremini Mushrooms – 8 oz., sliced introduce umami depth; button mushrooms work as a great substitute if needed.
- Yellow Onion – 1, finely chopped brings natural sweetness and depth to the sauce; no substitutions necessary!
- Tomato Paste – ¼ cup adds acidity and a rich depth of flavor to this comforting bake.
- Garlic – 4 cloves, minced enhances the aromatic essence of the whole dish.
- Crushed Red Pepper Flakes – ½ tsp. adds just the right kick of heat; adjust according to your spice preference.
- Fresh Baby Spinach – 3 to 4 handfuls introduce vibrant nutrients and color; kale or Swiss chard can easily replace it.
- Dried Oregano – 1 tsp. lends earthy flavors complementing the other ingredients.
- Kosher Salt – 1 tsp. balances flavors perfectly; feel free to adjust to taste.
- Black Pepper – ½ tsp. offers seasoning; adjust as desired for extra warmth.
- Ground Nutmeg – ¼ tsp. enhances the pumpkin flavor, making it all the more delightful.
- Vegetable Broth – 3 cups forms the moist base that unifies this savory bake.
- Pumpkin Puree – 1 (15-oz.) can is the key ingredient for creaminess and rich flavor; ensure it has no added sugars or spices.
- Grated Parmesan Cheese – ½ cup adds a sharp, creamy element; for a dairy-free alternative, try nutritional yeast.
- Grated Fontina Cheese – 1 ½ cups, divided delivers a melty texture; mozzarella or cheddar are worthy substitutes.
Step‑by‑Step Instructions for Cheesy Pumpkin Pasta Bake with Mushroom and Spinach
Step 1: Preheat the Oven
Start by preheating your oven to 375°F (190°C). This sets the stage for your Cheesy Pumpkin Pasta Bake to bake perfectly, ensuring the cheese is melted and bubbly while the topping becomes golden brown. A preheated oven guarantees an evenly cooked dish, creating a delightful experience right from the beginning.
Step 2: Cook the Pasta
In a large pot, bring salted water to a boil and add 1 lb. of tubular pasta such as mezzi rigatoni, shells, or ziti. Cook until just under al dente, about 2 minutes shy of package instructions. This step is crucial as the pasta will continue to cook in the oven. Once done, drain the pasta and set it aside while you prepare the sauce.
Step 3: Prepare the Walnut-Sage Topping
In a skillet, melt 2 tablespoons of butter over medium heat. Once melted, add ½ cup of finely chopped walnuts and 2 tablespoons of fresh sage. Sauté for about 5 minutes until fragrant and the walnuts are lightly toasted. This topping adds a wonderful crunch to your Cheesy Pumpkin Pasta Bake and provides depth of flavor, so be sure to keep an eye on it as it cooks.
Step 4: Sauté Onions and Mushrooms
Using the same skillet, add 2 tablespoons of olive oil and sauté 1 finely chopped yellow onion along with 8 oz. of sliced cremini mushrooms. Cook for 7-8 minutes until the onions are translucent and the mushrooms are tender. Stir occasionally to prevent sticking. This mix infuses your sauce with savory goodness, making every bite of the pasta bake truly delightful.
Step 5: Add Tomato Paste and Seasonings
Next, stir in ¼ cup of tomato paste, 4 minced garlic cloves, and ½ teaspoon of crushed red pepper flakes. Cook this mixture for 4-5 minutes until the tomato paste caramelizes slightly and thickens, stirring regularly. This step enhances the pasta bake’s flavor profile, adding a rich, tangy element to the creamy pumpkin sauce.
Step 6: Incorporate Spinach and Seasonings
Add 3 to 4 handfuls of fresh baby spinach to the skillet and cook, stirring frequently, until wilted, about 2-3 minutes. Season the mixture with 1 teaspoon each of dried oregano and kosher salt, ½ teaspoon of black pepper, and ¼ teaspoon of ground nutmeg. Stir in 3 cups of vegetable broth to create a luscious sauce, melding all the flavors together.
Step 7: Mix in the Pumpkin and Cheese
Stir in 1 (15-oz.) can of pumpkin puree, ½ cup of grated Parmesan cheese, and 1½ cups of divided grated Fontina cheese. Continue to cook gently until the cheeses are fully melted and incorporated into the sauce, about 5 minutes. This creamy mixture is the heart of your Cheesy Pumpkin Pasta Bake, enveloping each pasta piece in warmth and richness.
Step 8: Combine Pasta with Sauce
In a large mixing bowl, combine the cooked pasta with the pumpkin sauce, ensuring every piece is well-coated and flavorful. This step is key to achieving a harmonious blend of textures and tastes in the dish. Once mixed evenly, transfer the glorious pasta mixture into a greased 13×9-inch baking dish.
Step 9: Add Toppings and Bake
Sprinkle the remaining ½ cup of grated Fontina cheese over the top of the pasta bake, followed by the walnut-sage mixture you prepared earlier. Cover the dish with foil and place it in the preheated oven. Bake for 15 minutes to allow the flavors to meld beautifully.
Step 10: Final Bake for Cheese Perfection
After 15 minutes, uncover the pasta bake and return it to the oven for an additional 10-15 minutes. Keep an eye on it until the cheese is melted and golden brown. This finishing touch creates a deliciously crispy topping, completing your Cheesy Pumpkin Pasta Bake with Mushroom and Spinach to perfection.

How to Store and Freeze Cheesy Pumpkin Pasta Bake
Fridge: Store cooked Cheesy Pumpkin Pasta Bake in an airtight container for up to 5 days. This keeps the flavors fresh and ready for quick reheating.
Freezer: For longer storage, freeze the pasta bake in a tightly sealed container or heavy-duty freezer bag for up to 3 months. Thaw overnight in the fridge before reheating.
Reheating: When ready to enjoy, reheat individual portions in the microwave or bake in a preheated oven at 350°F (175°C) until warmed through, adding a splash of vegetable broth to maintain moisture.
Serving Tip: If you’re reheating from frozen, cover the dish with foil in the oven to prevent drying out while it warms. Enjoy the comforting flavors of your Pasta Bake with Pumpkin Tomato Sauce any time!
Expert Tips for Pasta Bake with Pumpkin Tomato Sauce
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Smooth Puree: Ensure your pumpkin puree is smooth and free of lumps for a velvety texture. This is key for achieving that creamy sauce.
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Perfect Pasta Time: Cook your pasta only until 2 minutes shy of al dente. This allows the pasta to finish cooking perfectly in the oven without becoming mushy.
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Chop Wisely: Use pre-cut vegetables to save time in the kitchen. It makes prep much quicker without sacrificing flavor.
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Storage Secrets: Store leftovers in an airtight container. They stay fresh for up to 5 days or can be frozen for up to 3 months, ensuring you have this comforting dish ready whenever you crave it.
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Adjust Spice Levels: Don’t forget to taste your sauce! Adjust the crushed red pepper flakes to find just the right level of heat for your family, making sure the dish is enjoyable for everyone.
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Season Generously: Always season as you go! Adding salt and pepper at each stage helps to build layers of flavor in your Pasta Bake with Pumpkin Tomato Sauce.
What to Serve with Cheesy Pumpkin Pasta Bake
As the rich aromas of this hearty dish swirl through your kitchen, consider these delightful pairings to create a memorable meal.
- Fresh Green Salad: A light, tangy salad with lemon vinaigrette adds brightness and crunch, balancing the dish’s creamy richness perfectly.
- Garlic Bread: Crispy and buttery, garlic bread is the ideal way to scoop up every comforting bite while adding a satisfying crunch to your meal.
- Roasted Brussels Sprouts: The caramelized edges of Brussels sprouts bring an earthy flavor and unique texture that complements the sweetness of the pumpkin bake wonderfully.
- Crispy Apple Chips: A sweet and crunchy side treat, apple chips offer a delightful contrast in texture and flavor, enhancing the fall vibe of your meal.
- Butternut Squash Soup: For a cozy pairing, serve a warm bowl of butternut squash soup to echo the autumnal flavors of your pasta bake while creating a comforting dining experience.
- Chardonnay: A chilled glass of Chardonnay balances the creamy pumpkin tomato sauce, its acidity cutting through the richness and enhancing every flavor.
- Pumpkin Spice Dessert: End your meal on a sweet note with a mini pumpkin pie or pumpkin spice cookies, delighting in the season’s beloved flavors.
Variations & Substitutions for Pasta Bake with Pumpkin Tomato Sauce
Feel free to let your creative flair shine as you customize this delightful dish to suit your taste or dietary needs!
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Gluten-Free: Use gluten-free pasta made from brown rice or chickpeas to enjoy the dish without sacrificing flavor or texture.
You’ll still get the same comforting essence without the gluten, making it inclusive for everyone at your table! -
Plant-Based: Replace Parmesan and Fontina with nutritional yeast or cashew cheese to create a completely dairy-free option.
Both alternatives will give you that cheesy depth while keeping it rich and satisfying—a win-win for your vegan friends! -
Extra Veggies: Add seasonal vegetables like zucchini, bell peppers, or roasted butternut squash for an even heartier dish.
This is an excellent way to sneak in more nutrition and create beautiful color in the final bake! -
Herb Twist: Swap out fresh sage for rosemary or thyme if you prefer a different herb profile.
These herbs will bring in their own unique flavor notes that can completely transform the dish into something bonus-worthy! -
Heat Level: For an extra kick, try adding diced jalapeños or a splash of hot sauce to the sauce mixture.
This infusion of heat will elevate your pasta bake, ensuring it’s an unforgettable blend of spice and comfort. -
Cheesy Mix: For a fun twist on cheesiness, incorporate a variety of cheeses such as Gouda, Havarti, or even a dash of blue cheese for added depth.
Mixing up cheese options can create a new flavor journey that will surprise and delight your tastebuds! -
Creamy Alternative: Transform the sauce’s creaminess by stirring in a dollop of cream cheese or a splash of heavy cream.
For wonderfully indulgent results, this will create an even richer backdrop for the pasta and all those delicious veggies. -
Saucy Variations: Consider adding a touch of pesto or sun-dried tomato paste to the sauce for a flavor boost.
Those little additions can add that extra zing that keeps everyone reaching for one more helping!
If you’re looking for more delightful dishes, don’t miss out on our recipes for Baked Boursin Pasta or Creamy Tomato Gnocchi. Each one will bring warmth and joy to your dining table!
Make Ahead Options
These Cheesy Pumpkin Pasta Bake with Mushroom and Spinach components are perfect for busy weeknights! You can prepare the sauce up to 3 days in advance by making it and then refrigerating it in an airtight container to preserve its rich flavor and creamy texture. Additionally, you can cook the pasta beforehand and toss it in a bit of olive oil to prevent it from sticking. When you’re ready to enjoy your bake, simply combine the prepped pasta and sauce in a greased baking dish, add the toppings, and bake directly from the refrigerator for about 25-30 minutes until heated through and bubbly. With these make-ahead options, getting a hearty, homemade meal on the table is a breeze!

Cheesy Pumpkin Pasta Bake with Mushroom and Spinach Recipe FAQs
What should I look for when selecting pumpkin puree?
Absolutely! When choosing pumpkin puree, ensure it’s 100% pure pumpkin with no added sugars or spices. Look for a smooth texture in the can—avoid any labeled “pumpkin pie filling,” as that contains additional ingredients that may alter the taste of your dish.
How do I store leftover cheesy pumpkin pasta bake?
Store your leftover Cheesy Pumpkin Pasta Bake in an airtight container in the fridge for up to 5 days. For maximum flavor retention, make sure it’s completely cooled before sealing. You can reheat it in the microwave or bake in the oven at 350°F (175°C) until warmed through.
Can I freeze cheesy pumpkin pasta bake, and if so, how?
Very! To freeze your Cheesy Pumpkin Pasta Bake, first let it cool completely. Then, portion it into freezer-safe containers or use a heavy-duty freezer bag, ensuring to remove excess air. It can be frozen for up to 3 months. When you’re ready to enjoy, thaw overnight in the fridge and reheat in the oven at 350°F (175°C) until heated through.
What if my pasta bake turns out too dry?
If you find your pasta bake a bit dry, don’t worry! Simply add a splash of vegetable broth or a drizzle of olive oil before reheating to restore moisture. Mix it gently to incorporate before serving. Keeping an eye on your baking time can also prevent this—the goal is to achieve that perfect creamy texture!
Is there a substitute for the cheeses in this recipe?
Definitely! If you’re looking for a dairy-free option, replace the grated Parmesan with nutritional yeast and use dairy-free cheese alternatives for the Fontina. There are many great brands available now that melt nicely, making it a perfect fit for your Cheesy Pumpkin Pasta Bake!
Can I use frozen spinach instead of fresh?
Yes, you can! When using frozen spinach, make sure to thaw and drain it well, squeezing out the excess moisture before adding it to your sauce. This helps prevent any excess water from making the pasta bake soggy, ensuring a delicious outcome.

Creamy Pasta Bake with Pumpkin Tomato Sauce Delight
Ingredients
Equipment
Method
- Preheat your oven to 375°F (190°C).
- In a large pot, bring salted water to a boil and add 1 lb. of dry tubular pasta. Cook until just under al dente, about 2 minutes shy of package instructions.
- In a skillet, melt 2 tablespoons of butter over medium heat. Add ½ cup of finely chopped walnuts and 2 tablespoons of fresh sage. Sauté for about 5 minutes until fragrant.
- In the same skillet, add 2 tablespoons of olive oil and sauté 1 finely chopped yellow onion along with 8 oz. of sliced cremini mushrooms for 7-8 minutes until onions are translucent.
- Stir in ¼ cup of tomato paste, 4 minced garlic cloves, and ½ teaspoon of crushed red pepper flakes. Cook for 4-5 minutes until tomato paste caramelizes slightly.
- Add 3-4 handfuls of fresh baby spinach and cook until wilted, about 2-3 minutes. Season with 1 teaspoon each of dried oregano and kosher salt, ½ teaspoon of black pepper, and ¼ teaspoon of ground nutmeg.
- Stir in 3 cups of vegetable broth, along with 1 can of pumpkin puree, ½ cup of grated Parmesan cheese, and 1½ cups of divided grated Fontina cheese. Cook until cheeses are fully melted.
- In a large mixing bowl, combine the cooked pasta with the pumpkin sauce and transfer the mixture into a greased 13x9-inch baking dish.
- Sprinkle the remaining ½ cup of grated Fontina cheese and the walnut-sage mixture on top. Cover with foil and bake for 15 minutes.
- Uncover and return the dish to the oven for an additional 10-15 minutes until the cheese is melted and golden brown.

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